

| Watershed | Average Score | Score Range |
| Los Penasquitos Watershed | 81 | Good |
| San Diego Watershed | 81 | Good |
| San Luis Rey Watershed | 79 | Fair |
| San Dieguito Watershed | 72 | Fair |
| Carlsbad Watershed | 64 | Marginal |
| Sweetwater Watershed | 64 | Marginal |
| Pueblo Watershed | 59 | Marginal |
| Otay Watershed | 49 | Marginal |
| Tijuana Watershed | 14 | Poor |












